Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015901597.1_cds_XP_016451648.1_45973
CDS Infomation	[gene=LOC107776283] [db_xref=GeneID:107776283] [protein=putative E3 ubiquitin-protein ligase LIN-1 isoform X5] [protein_id=XP_016451648.1] [location=join(15230..15247,15337..15596,15767..15827,15933..16304,16411..16478,16748..18031,18233..18377,18454..18711,18801..19110,19197..19321,19407..19526,19615..19746,20087..20209,20294..20404,20572..20715,20814..21065,21147..21164)] [gbkey=CDS]
Sequence	ATGTTATTCCTGATTCAAAAAGTCGAGCAGCTTTATGGACAGTCATTGGATGAGAATACA AGGCTTTATGCAAAATACTATAAGGACTGTATGAACTATGATTCTGTTACTTCAAAGAAG GCAATTCCTCTGTTGCCAATCGCAGAGCCACCGATGACTCCATTGCATGAGGTATGCCGG TCAATTCCTGATTATGTCAAATTTGGCCCAATATTGCCTAAGAGTGCCGGGTTTACTCCT ATTCTGAGAGTCAAGGAGAATGCAAATGGAGCCTCAAGATTGAATATGACTTCTTCGTCG TCTGAGAATCAGGAGGACTCCACGACTAGGGATCCACTAAAAGGAATTCCTGAGGTGGAT GAAGAAGATTATGACCCTGAGCCTCATGTATACACTACATCGAATAAAAGGAATCAAGAA AACAATTTATCCTATTGTAGTGGAGTGAATAAGGATGTAGAAGCCAGGTCCAAAGTCAAG CAAATTAATACAAACCAAAGACAATCTCCTAAGTCCTTCCCTTCAATGGACTTCCCTAAA CTGGAGTCCCCTAAAGCTCCTTCACCAAAGGGAACCGATACCCCCTCGAAGAAAGGTGTA CCTGTGTTACGCCTCTTGTCTGGACGTGTTAAGGACACTTCAAGTTCTATTTCTTTGCAT TCATCCCAAGAGTTAAAAATTAGCTCAGCAGACTCGGATGACGAAAGGACAGAGCAGCAT GAAACTGCAGGGAAAAGAAATTCTCATAGGTGGAGCCTTAGTCAATCCTTAGAAAAAGGC TCTCCGGATGGTAGTGATGAAGGAAGTCACAGCTGCATTTCTCTCCCATTGTCGGATAAG TCGACTGCTCCATCAAGGCCACCTAAAGATTTTGTCTGTCCGATAACTGGACAGATATTC AATGATCCCGTCACCCTTGAAACCGGTCAAACATATGAAAGGAAAGCCATCCAAGAATGG ATGAATAGAGGCAATACAACATGCCCCATTACAAGGCAGTCTTTATCTGCATCTACTCTT CCTAAAACCAACTATGTCCTGAAGCGACTAATAACGTCTTGGAGAGAACAGCACCCTGAC CTAGCACAGGAGTTTTCTTACTCTGAAACACCAAGAAGTTATTTAACCATTCCCTCTTCA AGAGAGAGGTCATCTGAATCTACTCCATCTCCAACATTTAATCATCCCAATCATAGGCGC ATAGAGGAAATCATCGAACAAAGATCACGGAGATTTATGCGAGCAGCTGTATCTATGTCA CCTACAAGTGTAATTTCTCAAGCAGCAACTGAAGCAATTATCAATGGCTTAAAACCTTAT GTTTCATGTCTGTGCACTTCAGAGGACTTACAAGAATGTGAACATGCCATATTGACTATA GCAAAGATATGGGGTGACTCGAAACTTGAATCTCAAGGAGTTCACTCCTACTTATCTGCA CCAACAATAGTGAACGGATTTGTAGAGGTATTATCAGCTTCCCAAAAGAGGGAAGTTTTA AGGACGGCAATTTATATTTTGTCCGAGCTATTATATGCAGAGGATAGAGTTGGTGAGATC CTCACAAGTGTGGACTCAGATTTTGAATGTCTAGCTACTTTATTAAAAGATGGTCTTGCT GAAGCAGCGGTTCTTATTTACCTACTCAGGCCATCATTCTCTCAACTTTCAGCTCATAAT TTTGTACCCTCTCTTACTCAGATTATCTCAAACAGAAGTGAGGATTTTAGTGATTTTCAG TTCACAATAGGACCAAAGGATGCCGCTGTTGTGTTGCTCGAGCAAATTATTACTGGAGGA GGTGAGAGCGATCGATCATTCAATGCTATGCAGATTATATCAGGAAATGGTATTCTTGCC TTGCTCAAGTGCCTAGACCATGAAAATGGTAGAGAGTCCATTATATGCATACTTTTGTGC TGTATTCGGGCTGATAAGAGTTGCAGAAATACAATAGCTAGTAGAATTGAGTTCTCTCCT GTTCTTGAGTTAATTCACACAGGAAGCGATAGCGTGAAAGGCACATGCATAGAACTTCTT TATGAGTTAGTTTTGTTAAGCAGGAGAACATTGTGCAACCAGATTCTGCAGATAATTAAG GATGAGGGAGCATTTAGTACAATGCACACTCTTCTTGTCTGTCTTCAAATGGCTTCAATG GAGCAGAAATCTACCATTGCTCCTCTTCTTTTACAGCTTGACCTTCTGGTTGAGCCTCGG CAAATGAGCATATACAGGGAAGAATCGATAGAGGCACTGATTGAAGCACTACACAAAAAG GACTTCCCCGCGTCTCAGCTCAGCGCTCTTGATGCCTTGTTATCTCTTTCCGGGCATCTA ACTAACTCTGGTAAGTCCTTTCTTGAAGCTCGGCTACTCAAGATTGCGGGATTTAATCAG CGATATAATGCCACGATGAAAGAAGAGAGGCAAAAAGCAGGTGAAAATGACACCACCAAT ATAATGGAAGAGGAAGAAAAAGCTCTGAGTTCTTGGGAAAATAGAACAGCTTTTGTTCTT TGCAACCATGAGAAAGGATTAATATTCAGAGCTTTAGAAGAATGCCTTAAGAGCACCTCA ATGGAGATAGCAAAATCTTCCTTTATTGTAGCCACATGGCTAATTCACATGCTCTATAAA TTTCCCGATACTGGAATTAGAGATGTTGCTCGTAAGTCTTTGCTTGAGCAATTTATACAG ATGCTCCAGTCGACAAAGAATATCGAGGAGAAGATCTTGGCAGCTCTTGCTTTGCGAGGC TTTATTACTGATTTAGGTGCACTCAGCGAACTGGGAATATATGCCAAATGTTTGTGCAAA AGCTTGAGGAAACTTAAAAAGTACTCTATAGTGGTCAGTGACATAATGAAAACCTTGATG AACTTGCCATGTATTGATGCTGCAGAATTATGGTGCTATTCTGAATGTCCTGAGGTGGAT GTGTCGATGAATGGAGAAGTTCTTTGTCTGCTCCACATAAGAGGTCGACTCATTAGCAGT CATTCCGATGGAACCATTAAGGTCTGGGAAACTGGAAAAAGAGCTCCTCGGTTAATTCAT GAAACACGCGAGCACGCAAAGGCTGTTACATGCCTTTACGTTTCATCTTCATGTGATAAA CTTTATAGTGGCTCATTGGACAGAACTATCCGGGTTTGGGCTATCAATCAAGAGGAAATC CACTGTCTTCAGGTTCATGATGTGAAAGAGCCGGTGCTTGAGTTGATAGCAAACACTCAA TTTGCATGCTTCGCATCTCAAGCGACAGGAGTTAAGGTTTATAATTGGTCAGGGGTTCCC AAGCATGTAAACTTCCAAAAAAATGTCAAGTGCCTCGCCATTATGGGCGATAAACTTTAT TGCGGATGCACAGGTTATAGTATCCAGGAAGTTGATTTAAGCTCTCAAACATCAACAACA TTTTATGCTGGTGCCAAGAAGTTGTTGGGAAAACAGAATATCTATTCCCTCCAAGTTCAA AAAAATGTTGTGTTTGCTGGTGGTTCCTTAGTTGATGGAATATCCGGAAAGGTATTTTCT CTCCCTAGCAAGGCAGTCATTGGATCACTTTCAATCTGTTCAGACATCCAACGATTAGCA GTAAACAACGATTTCATATTTTCCGCCACAAAATCTGGCACCATAGAGGTATGGCTGCAA GAAAGAGTTACAAAAATCACTTCCATTAAGATGAAAAGTGGTGGACAGTCTAAAATTACA TCTTTAGCTGTGGATAAAGATGGAGAAATGATATTTGCTGGTTCTACAGATGGAAAAATT CAGGTTTGGCGTTTGGATTAA

Peptide Sequence

PEP ID	XP_016451648.1
PEP Infomation	PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X5 [Nicotiana tabacum]
Sequence	MLFLIQKVEQLYGQSLDENTRLYAKYYKDCMNYDSVTSKKAIPLLPIAEPPMTPLHEVCR SIPDYVKFGPILPKSAGFTPILRVKENANGASRLNMTSSSSENQEDSTTRDPLKGIPEVD EEDYDPEPHVYTTSNKRNQENNLSYCSGVNKDVEARSKVKQINTNQRQSPKSFPSMDFPK LESPKAPSPKGTDTPSKKGVPVLRLLSGRVKDTSSSISLHSSQELKISSADSDDERTEQH ETAGKRNSHRWSLSQSLEKGSPDGSDEGSHSCISLPLSDKSTAPSRPPKDFVCPITGQIF NDPVTLETGQTYERKAIQEWMNRGNTTCPITRQSLSASTLPKTNYVLKRLITSWREQHPD LAQEFSYSETPRSYLTIPSSRERSSESTPSPTFNHPNHRRIEEIIEQRSRRFMRAAVSMS PTSVISQAATEAIINGLKPYVSCLCTSEDLQECEHAILTIAKIWGDSKLESQGVHSYLSA PTIVNGFVEVLSASQKREVLRTAIYILSELLYAEDRVGEILTSVDSDFECLATLLKDGLA EAAVLIYLLRPSFSQLSAHNFVPSLTQIISNRSEDFSDFQFTIGPKDAAVVLLEQIITGG GESDRSFNAMQIISGNGILALLKCLDHENGRESIICILLCCIRADKSCRNTIASRIEFSP VLELIHTGSDSVKGTCIELLYELVLLSRRTLCNQILQIIKDEGAFSTMHTLLVCLQMASM EQKSTIAPLLLQLDLLVEPRQMSIYREESIEALIEALHKKDFPASQLSALDALLSLSGHL TNSGKSFLEARLLKIAGFNQRYNATMKEERQKAGENDTTNIMEEEEKALSSWENRTAFVL CNHEKGLIFRALEECLKSTSMEIAKSSFIVATWLIHMLYKFPDTGIRDVARKSLLEQFIQ MLQSTKNIEEKILAALALRGFITDLGALSELGIYAKCLCKSLRKLKKYSIVVSDIMKTLM NLPCIDAAELWCYSECPEVDVSMNGEVLCLLHIRGRLISSHSDGTIKVWETGKRAPRLIH ETREHAKAVTCLYVSSSCDKLYSGSLDRTIRVWAINQEEIHCLQVHDVKEPVLELIANTQ FACFASQATGVKVYNWSGVPKHVNFQKNVKCLAIMGDKLYCGCTGYSIQEVDLSSQTSTT FYAGAKKLLGKQNIYSLQVQKNVVFAGGSLVDGISGKVFSLPSKAVIGSLSICSDIQRLA VNNDFIFSATKSGTIEVWLQERVTKITSIKMKSGGQSKITSLAVDKDGEMIFAGSTDGKI QVWRLD

Transcript Sequence

Gene sequence data has not been registered.